Conformational Epitope Prediction Server

Developed@Bioinformatics Centre, University of Pune, INDIA

Bioinfo@UoP CE Server Help

Predicted Conformational Epitopes(CE) and Sequential Epitopes (SE)


CE No AD within 6A of Reference AD Res within 6A of Ref AD
Predicted CE
1 A_108: NPWTEYmAK :116
A_296: DNwEKV :301
A_315: WVDGNcEDiPHVNEFPaID :333
A_413: NVKpT :417

2 A_185: PTEPL :189
A_192: PmTlDEmRHFyKDNKYvKNlD :212

3 A_192: PmTlDEmRHFyKDNKYvKNlD :212
A_185: PTEPL :189
A_242: DKDKK :246
A_296: DNwEKV :301

A_219: R
A_223: N
4 A_242: DKDKK :246
A_192: PmTlDEmRHFyKDNKYvKNlD :212

A_286: N
5 A_258: NGPrYC :263
A_351: KqYEQHLTD :359

A_274: F
6 A_296: DNwEKV :301
A_108: NPWTEYmAK :116
A_192: PmTlDEmRHFyKDNKYvKNlD :212

A_304: R
7 A_315: WVDGNcEDiPHVNEFPaID :333
A_108: NPWTEYmAK :116
A_404: TETQK :408
A_413: NVKpT :417

A_336: E
A_340: L
A_344: L
A_397: Y
8 A_404: TETQK :408
A_315: WVDGNcEDiPHVNEFPaID :333

9 A_413: NVKpT :417
A_108: NPWTEYmAK :116
A_315: WVDGNcEDiPHVNEFPaID :333

Predicted SE
1 A_435: IEVE :438 A_305: K
A_308: Q
2 A_159: ENSNtT :164 A_167: T
A_177: K
3 A_281: DIS :283 A_286: N
A_339: K
4 A_421: NNS :423 A_309: N


Note: Residues with accessibility less than 25% are shown in lower case


Antigenic Determinants
Antigenic Determinants mapped on structure
Predicted epitopes mapped on structure